primary structure

(redirected from Biological sequence)
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primary structure

n.
The linear sequence of amino acids in a protein or of nucleotides in a nucleic acid.
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Provision of an integrated Biological Sequence Query System to the EPO as a Service.
BioEdit: A user-friendly biological sequence alignment editor and analysis program for windows 95/98/NT.
The intuitive solution combines content, search, analysis, and reporting functionality to produce the market-leading biological sequence search tool.
This biological sequence alignment was performed by using bioedit software (Hall, 1999).
Basic Local Alignment Search Tool (BLAST) is one of the most commonly used web tools for comparing primary biological sequence information whether proteins or DNA sequences.
Biological sequence analysis is the heart of computational biology [2].
Biological sequence analysis using the SeqAn C++ library.
The product provides intellectual property professionals and scientists with interactive access to a comprehensive source of biological sequence information.
While custom in-house code will be written for these large data searches, TGen reports that benchmarks were run on the National Center for Biotechnology Information (NCBI) BLAST (Basic Local Alignment Search Tool), an algorithm for comparing primary biological sequence information, ClustalW, a general purpose multiple sequence alignment program for DNA or proteins, and NAMD, a parallel molecular dynamics code for large biomolecular systems.
Compiled from 15 assembled resources including GenBank, RefSeq, Entrez Gene and UniProtKB/Swiss-Prot, BONDplus allows researchers to move beyond the genome and leverage publicly available biological sequence data, BINDplus biomolecular interaction data as well as GENESEQ, a value added database of patented biological sequences.
The nodes of an abstract syntax tree are used to generate a suffix tree and we use the same methods on the suffix tree that have been successfully applied to biological sequence matching to search for duplicate sections of code.

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